Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | E0E99_19480 | Not Available | Positive | 3927127 - 3927594 | 17194.1 |
| flagellar motor switch protein flim | E0E99_19485 | Not Available | Positive | 3927599 - 3928603 | 37937.6 |
| flagellar motor switch protein flin | E0E99_19490 | Not Available | Positive | 3928600 - 3929013 | 14797.8 |
| flagellar type iii secretion system protein flio | E0E99_19495 | Not Available | Positive | 3929013 - 3929390 | 12953.0 |
| flagellar biosynthesis protein flip | E0E99_19500 | Not Available | Positive | 3929390 - 3930127 | 26894.1 |
| flagellar biosynthesis protein fliq | E0E99_19505 | Not Available | Positive | 3930137 - 3930406 | 9590.45 |
| flagellar type iii secretion system protein flir | E0E99_19510 | Not Available | Positive | 3930415 - 3931200 | 28441.4 |
| transcriptional regulator rcsa | E0E99_19515 | Not Available | Positive | 3931489 - 3932112 | 23428.8 |
| protein dsrb | E0E99_19520 | Not Available | Negative | 3932167 - 3932409 | 9029.81 |
| peroxide/acid resistance protein yodd | E0E99_19525 | Not Available | Positive | 3932519 - 3932746 | 8677.87 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

