Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | E0E99_19430 | Not Available | Positive | 3917499 - 3918434 | 35080.7 |
| hypothetical protein | E0E99_19435 | Not Available | Positive | 3918424 - 3919866 | 53755.0 |
| flagellar hook-basal body complex protein flie | E0E99_19440 | Not Available | Negative | 3920081 - 3920395 | 11234.7 |
| hypothetical protein | E0E99_19445 | Not Available | Negative | 3920442 - 3920627 | 7069.6 |
| flagellar basal body m-ring protein flif | E0E99_19450 | Not Available | Positive | 3920612 - 3922285 | 61308.7 |
| flagellar motor switch protein flig | E0E99_19455 | Not Available | Positive | 3922278 - 3923276 | 36937.4 |
| flagellar assembly protein flih | E0E99_19460 | Not Available | Positive | 3923269 - 3923976 | 25981.6 |
| flagellum-specific atp synthase flii | E0E99_19465 | Not Available | Positive | 3923976 - 3925346 | 49189.4 |
| flagella biosynthesis chaperone flij | E0E99_19470 | Not Available | Positive | 3925368 - 3925811 | 17355.5 |
| flagellar hook length control protein flik | E0E99_19475 | Not Available | Positive | 3925808 - 3927022 | 41257.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

