Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | E0E99_19275 | Not Available | Positive | 3892552 - 3893997 | 51211.9 |
| hth-type transcriptional activator aaer | E0E99_19280 | Not Available | Negative | 3894084 - 3895013 | 34388.9 |
| duf1656 domain-containing protein | E0E99_19285 | Not Available | Positive | 3895198 - 3895401 | 7861.04 |
| p-hydroxybenzoic acid efflux pump subunit aaea | E0E99_19290 | Not Available | Positive | 3895409 - 3896341 | 34679.6 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | E0E99_19295 | Not Available | Positive | 3896347 - 3898314 | 73358.8 |
| hypothetical protein | E0E99_19300 | Not Available | Positive | 3898434 - 3898712 | 10966.0 |
| peroxide/acid stress response protein yhcn | E0E99_19305 | Not Available | Negative | 3898770 - 3899036 | 9314.13 |
| Trna-leu | Not Available | Not Available | Positive | 3899229 - 3899315 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3899328 - 3899401 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3899453 - 3899528 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

