Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-methionine-sulfoxide reductase catalytic subunit msrp | E0E99_19225 | Not Available | Negative | 3879211 - 3880215 | 37236.6 |
| oxidoreductase | E0E99_19230 | Not Available | Negative | 3880335 - 3881309 | 34524.7 |
| rnase e specificity factor csrd | E0E99_19235 | Not Available | Positive | 3881535 - 3883475 | 73189.9 |
| hypothetical protein | E0E99_19240 | Not Available | Negative | 3883484 - 3883684 | 7325.12 |
| rod shape-determining protein | E0E99_19245 | Not Available | Positive | 3883782 - 3884825 | 36954.7 |
| rod shape-determining protein mrec | E0E99_19250 | Not Available | Positive | 3884892 - 3885914 | 36858.8 |
| rod shape-determining protein mred | E0E99_19255 | Not Available | Positive | 3885915 - 3886403 | 18715.7 |
| septum formation inhibitor maf | E0E99_19260 | Not Available | Positive | 3886411 - 3887004 | 21375.7 |
| ribonuclease g | E0E99_19265 | Not Available | Positive | 3886994 - 3888463 | 55515.7 |
| asma2 domain-containing protein | E0E99_19270 | Not Available | Positive | 3888575 - 3892390 | 139555.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

