Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_19065 | Not Available | Positive | 3846535 - 3846942 | 15911.5 |
| duf4832 domain-containing protein | E0E99_19070 | Not Available | Positive | 3846974 - 3848365 | 52282.1 |
| udp-glucose 4-epimerase gale | E0E99_19075 | Not Available | Negative | 3848412 - 3849428 | 36880.9 |
| hypothetical protein | E0E99_19080 | Not Available | Negative | 3849481 - 3850419 | 36746.1 |
| carbonic anhydrase | E0E99_19085 | Not Available | Negative | 3850629 - 3851264 | 23171.8 |
| hypothetical protein | E0E99_19090 | Not Available | Positive | 3851523 - 3852014 | 17009.2 |
| signal transduction protein | E0E99_19095 | Not Available | Negative | 3852093 - 3853841 | 64950.3 |
| diaminopropionate ammonia-lyase | E0E99_19100 | Not Available | Positive | 3854223 - 3855437 | 43945.6 |
| ygey family selenium metabolism-linked hydrolase | E0E99_19105 | Not Available | Positive | 3855470 - 3856654 | 43130.0 |
| d-aminoacylase | E0E99_19110 | Not Available | Positive | 3856722 - 3858314 | 58031.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

