Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_18860 | Not Available | Negative | 3799924 - 3800493 | 21251.0 |
| dna helicase | E0E99_18865 | Not Available | Positive | 3800643 - 3803345 | 102224.0 |
| duf87 domain-containing protein | E0E99_18870 | Not Available | Positive | 3803338 - 3805314 | 73283.7 |
| hypothetical protein | E0E99_18875 | Not Available | Positive | 3805317 - 3805703 | 14504.8 |
| duf4400 domain-containing protein | E0E99_18880 | Not Available | Positive | 3805688 - 3806338 | 24971.3 |
| hypothetical protein | E0E99_18885 | Not Available | Positive | 3806423 - 3806716 | 11002.6 |
| disulfide bond formation protein dsba | E0E99_18890 | Not Available | Positive | 3806713 - 3807531 | 29614.2 |
| type iv conjugative transfer system protein tral | E0E99_18895 | Not Available | Positive | 3807581 - 3807865 | 10660.2 |
| trae family protein | E0E99_18900 | Not Available | Positive | 3807862 - 3808488 | 22812.7 |
| trak protein | E0E99_18905 | Not Available | Positive | 3808729 - 3809766 | 37339.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

