Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase yajl | E0E99_00610 | Not Available | Positive | 124259 - 124849 | 20872.3 |
| hypothetical protein | E0E99_00615 | Not Available | Positive | 124882 - 125964 | 40313.5 |
| trna 4-thiouridine(8) synthase thii | E0E99_00620 | Not Available | Negative | 126030 - 127478 | 54873.2 |
| exodeoxyribonuclease vii small subunit | E0E99_00625 | Not Available | Positive | 127675 - 127917 | 8894.39 |
| (2e,6e)-farnesyl diphosphate synthase | E0E99_00630 | Not Available | Positive | 127918 - 128817 | 32064.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | E0E99_00635 | Not Available | Positive | 128842 - 130704 | 67636.9 |
| 1-deoxyxylulose-5-phosphate synthase yajo | E0E99_00640 | Not Available | Positive | 130761 - 131735 | 36266.0 |
| phosphatidylglycerophosphatase a | E0E99_00645 | Not Available | Negative | 131805 - 132323 | 19452.2 |
| thiamine-phosphate kinase | E0E99_00650 | Not Available | Negative | 132301 - 133278 | 34878.4 |
| transcription antitermination factor nusb | E0E99_00655 | Not Available | Negative | 133356 - 133775 | 15689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

