Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_18500 | Not Available | Negative | 3741502 - 3742026 | 20238.9 |
| xre family transcriptional regulator | E0E99_18505 | Not Available | Positive | 3742170 - 3742361 | 7460.85 |
| hypothetical protein | E0E99_18510 | Not Available | Positive | 3742453 - 3742776 | 12067.8 |
| hypothetical protein | E0E99_18515 | Not Available | Negative | 3742998 - 3746375 | 128246.0 |
| hypothetical protein | E0E99_18520 | Not Available | Negative | 3746579 - 3746824 | 9097.38 |
| hypothetical protein | E0E99_18525 | Not Available | Negative | 3746873 - 3747532 | 24694.5 |
| hypothetical protein | E0E99_18530 | Not Available | Negative | 3747594 - 3748418 | 30661.2 |
| hypothetical protein | E0E99_18535 | Not Available | Negative | 3748418 - 3748717 | 11095.5 |
| hypothetical protein | E0E99_18540 | Not Available | Negative | 3748750 - 3749100 | 13479.0 |
| hypothetical protein | E0E99_18545 | Not Available | Negative | 3749351 - 3749698 | 12667.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

