Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | E0E99_18100 | Not Available | Negative | 3678422 - 3679780 | 48338.4 |
| lysr family transcriptional regulator | E0E99_18105 | Not Available | Positive | 3679907 - 3680815 | 33612.1 |
| hypothetical protein | E0E99_18110 | Not Available | Positive | 3680947 - 3681345 | 14615.7 |
| cidb/lrgb family autolysis modulator | E0E99_18115 | Not Available | Positive | 3681342 - 3682037 | 24383.0 |
| cytidine deaminase | E0E99_18120 | Not Available | Positive | 3682186 - 3683070 | 31744.8 |
| outer membrane permeability protein sana | E0E99_18125 | Not Available | Positive | 3683205 - 3683924 | 27339.4 |
| duf2542 family protein | E0E99_18130 | Not Available | Positive | 3683927 - 3684166 | 9267.48 |
| nad(p)-dependent oxidoreductase | E0E99_18135 | Not Available | Positive | 3684400 - 3685641 | 44615.7 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | E0E99_18140 | Not Available | Positive | 3685635 - 3686870 | 45064.4 |
| galactose/methyl galactoside abc transporter permease mglc | E0E99_18145 | Not Available | Negative | 3686928 - 3687938 | 35620.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

