Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yip1 family protein | E0E99_18050 | Not Available | Negative | 3669791 - 3670378 | 21631.9 |
| deda family protein | E0E99_18055 | Not Available | Positive | 3670621 - 3671190 | 21013.4 |
| multidrug resistance outer membrane protein mdtq | E0E99_18060 | Not Available | Negative | 3671228 - 3672667 | 52198.4 |
| class i sam-dependent methyltransferase | E0E99_18065 | Not Available | Positive | 3672837 - 3673571 | 27404.5 |
| protein yohp | E0E99_18070 | Not Available | Positive | 3673643 - 3673726 | 3134.37 |
| trna dihydrouridine(16) synthase dusc | E0E99_18075 | Not Available | Negative | 3673795 - 3674733 | 34768.0 |
| 3-hydroxybenzoate 6-monooxygenase | E0E99_18080 | Not Available | Negative | 3674795 - 3675988 | 44074.6 |
| maleylacetoacetate isomerase | E0E99_18085 | Not Available | Negative | 3676003 - 3676647 | 23805.6 |
| faa hydrolase family protein | E0E99_18090 | Not Available | Negative | 3676656 - 3677357 | 25969.9 |
| gentisate 1,2-dioxygenase | E0E99_18095 | Not Available | Negative | 3677373 - 3678410 | 39190.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

