Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_17795 | Not Available | Positive | 3621275 - 3621454 | 6429.61 |
| dna-binding protein stpa | E0E99_17800 | Not Available | Negative | 3621491 - 3621892 | 15202.3 |
| l-alanine exporter alae | E0E99_17805 | Not Available | Positive | 3622450 - 3622899 | 16810.7 |
| duf2002 family protein | E0E99_17810 | Not Available | Negative | 3622936 - 3623286 | 13284.7 |
| plp-dependent aminotransferase family protein | E0E99_17815 | Not Available | Negative | 3623535 - 3624869 | 49951.3 |
| carboxymuconolactone decarboxylase family protein | E0E99_17820 | Not Available | Positive | 3624960 - 3625391 | 16039.3 |
| glutaredoxin-like protein nrdh | E0E99_17825 | Not Available | Positive | 3625671 - 3625916 | 9358.22 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | E0E99_17830 | Not Available | Positive | 3625913 - 3626323 | 15296.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | E0E99_17835 | Not Available | Positive | 3626296 - 3628440 | 80344.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | E0E99_17840 | Not Available | Positive | 3628451 - 3629410 | 36230.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

