Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein repe | E0E99_17635 | Not Available | Negative | 3596890 - 3597642 | 29024.7 |
| translesion error-prone dna polymerase v subunit umuc | E0E99_17640 | Not Available | Negative | 3598088 - 3599362 | 47570.6 |
| translesion error-prone dna polymerase v autoproteolytic subunit | E0E99_17645 | Not Available | Negative | 3599362 - 3599784 | 15604.8 |
| recombinase | E0E99_17650 | Not Available | Positive | 3600076 - 3601029 | 35318.1 |
| plasmid stability protein | E0E99_17655 | Not Available | Positive | 3601035 - 3601409 | 14315.8 |
| hypothetical protein | E0E99_17660 | Not Available | Positive | 3601411 - 3601740 | 12364.8 |
| hypothetical protein | E0E99_17665 | Not Available | Positive | 3601817 - 3602116 | 10966.4 |
| duf1281 domain-containing protein | E0E99_17670 | Not Available | Positive | 3602210 - 3603145 | 34835.5 |
| hypothetical protein | E0E99_17675 | Not Available | Positive | 3603178 - 3603525 | 13116.4 |
| dna methylase | E0E99_17680 | Not Available | Positive | 3603902 - 3604582 | 25284.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

