Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper/silver sensor histidine kinase sils | E0E99_17575 | Not Available | Positive | 3586436 - 3587911 | 55903.5 |
| copper-binding protein | E0E99_17580 | Not Available | Positive | 3588157 - 3588588 | 15234.0 |
| duf305 domain-containing protein | E0E99_17585 | Not Available | Positive | 3588734 - 3589084 | 12851.7 |
| hnh endonuclease | E0E99_17590 | Not Available | Negative | 3589492 - 3590400 | 34366.1 |
| hypothetical protein | E0E99_17595 | Not Available | Positive | 3591817 - 3592236 | 15283.7 |
| hypothetical protein | E0E99_17600 | Not Available | Positive | 3592283 - 3592705 | 16455.8 |
| phage integrase family protein | E0E99_17605 | Not Available | Positive | 3592702 - 3593484 | 29202.8 |
| duf1173 family protein | E0E99_17620 | Not Available | Negative | 3593967 - 3595253 | 48965.3 |
| dna-binding plasmid partition protein | E0E99_17625 | Not Available | Positive | 3595473 - 3596099 | 22758.2 |
| hypothetical protein | E0E99_17630 | Not Available | Positive | 3596141 - 3596368 | 8341.25 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

