Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | E0E99_17525 | Not Available | Positive | 3575133 - 3575870 | 27025.2 |
| duf2933 domain-containing protein | E0E99_17530 | Not Available | Negative | 3575904 - 3576101 | 7270.75 |
| ag(+)-translocating p-type atpase silp | E0E99_17535 | Not Available | Negative | 3576142 - 3578589 | 87041.6 |
| hypothetical protein | E0E99_17540 | Not Available | Negative | 3578716 - 3579156 | 15494.0 |
| cu(+)/ag(+) efflux rnd transporter permease subunit sila | E0E99_17545 | Not Available | Negative | 3579243 - 3582389 | 114552.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit silb | E0E99_17550 | Not Available | Negative | 3582400 - 3583692 | 47780.4 |
| copper abc transporter substrate-binding protein | E0E99_17555 | Not Available | Negative | 3583806 - 3584159 | 12618.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel silc | E0E99_17560 | Not Available | Negative | 3584188 - 3585573 | 51164.6 |
| outer-membrane efflux lipo domain protein | E0E99_17565 | Not Available | Negative | 3585636 - 3585761 | 4876.11 |
| copper/silver response regulator transcription factor silr | E0E99_17570 | Not Available | Positive | 3585763 - 3586443 | 25214.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

