Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin | E0E99_17475 | Not Available | Positive | 3566669 - 3566848 | 6723.9 |
| type ii toxin-antitoxin system rele/pare family toxin | E0E99_17480 | Not Available | Positive | 3566835 - 3567161 | 12023.1 |
| copper-binding protein | E0E99_17485 | Not Available | Negative | 3567311 - 3567745 | 15898.8 |
| copper resistance membrane spanning protein pcos | E0E99_17490 | Not Available | Negative | 3567961 - 3569361 | 52942.6 |
| copper response regulator transcription factor pcor | E0E99_17495 | Not Available | Negative | 3569358 - 3570038 | 25677.1 |
| copper resistance inner membrane protein pcod | E0E99_17500 | Not Available | Negative | 3570093 - 3571022 | 33707.3 |
| copper resistance system metallochaperone pcoc | E0E99_17505 | Not Available | Negative | 3571027 - 3571407 | 13257.2 |
| copper resistance outer membrane transporter pcob | E0E99_17510 | Not Available | Negative | 3571447 - 3572343 | 33203.0 |
| multicopper oxidase pcoa | E0E99_17515 | Not Available | Negative | 3572343 - 3574160 | 67311.5 |
| copper resistance protein | E0E99_17520 | Not Available | Positive | 3574395 - 3574844 | 16273.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

