Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar efflux transporter setb | E0E99_17410 | Not Available | Positive | 3555149 - 3556330 | 42583.5 |
| fe-s-cluster oxidoreductase | E0E99_17415 | Not Available | Negative | 3556327 - 3556512 | 6559.13 |
| resolvase | E0E99_17420 | Not Available | Positive | 3556602 - 3558518 | 72913.8 |
| duf1311 domain-containing protein | E0E99_17430 | Not Available | Positive | 3558969 - 3559541 | 21311.8 |
| hypothetical protein | E0E99_17435 | Not Available | Positive | 3559531 - 3559899 | 14042.6 |
| hypothetical protein | E0E99_17440 | Not Available | Positive | 3559883 - 3560479 | 22342.2 |
| hypothetical protein | E0E99_17445 | Not Available | Negative | 3560651 - 3562078 | 53165.7 |
| hypothetical protein | E0E99_17450 | Not Available | Negative | 3562088 - 3563815 | 63632.6 |
| hypothetical protein | E0E99_17465 | Not Available | Negative | 3565133 - 3566095 | 35719.8 |
| hypothetical protein | E0E99_17470 | Not Available | Negative | 3566092 - 3566355 | 10238.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

