Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein napc | E0E99_17110 | Not Available | Negative | 3511676 - 3512278 | 23287.1 |
| nitrate reductase cytochrome c-type subunit | E0E99_17115 | Not Available | Negative | 3512288 - 3512737 | 16314.5 |
| quinol dehydrogenase ferredoxin subunit naph | E0E99_17120 | Not Available | Negative | 3512734 - 3513597 | 31630.1 |
| ferredoxin-type protein napg | E0E99_17125 | Not Available | Negative | 3513584 - 3514279 | 25027.3 |
| nitrate reductase catalytic subunit napa | E0E99_17130 | Not Available | Negative | 3514286 - 3516772 | 93095.2 |
| chaperone napd | E0E99_17135 | Not Available | Negative | 3516769 - 3517032 | 9542.21 |
| ferredoxin-type protein napf | E0E99_17140 | Not Available | Negative | 3517022 - 3517513 | 18006.2 |
| ecotin | E0E99_17145 | Not Available | Positive | 3517928 - 3518425 | 18428.1 |
| malate dehydrogenase (quinone) | E0E99_17150 | Not Available | Negative | 3518518 - 3520179 | 60869.8 |
| fused pts fructose transporter subunit iia/hpr protein | E0E99_17405 | Not Available | Negative | 3553651 - 3554781 | 39700.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

