Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_16990 | Not Available | Negative | 3494354 - 3494698 | 12554.9 |
| bcr/cfla family multidrug efflux mfs transporter | E0E99_17000 | Not Available | Negative | 3495032 - 3496222 | 43405.6 |
| 16s rrna pseudouridine(516) synthase rsua | E0E99_17005 | Not Available | Negative | 3496238 - 3496945 | 26589.5 |
| dead/deah box helicase | E0E99_17010 | Not Available | Positive | 3497096 - 3498856 | 66413.8 |
| 50s ribosomal protein l25 | E0E99_17015 | Not Available | Positive | 3498981 - 3499265 | 10464.8 |
| nucleoid-associated protein yejk | E0E99_17020 | Not Available | Negative | 3499386 - 3500393 | 37810.6 |
| duf1414 domain-containing protein | E0E99_17025 | Not Available | Positive | 3500528 - 3500755 | 8330.93 |
| duf3413 domain-containing protein | E0E99_17030 | Not Available | Positive | 3500787 - 3502547 | 67022.5 |
| Trna-pro | Not Available | Not Available | Positive | 3502622 - 3502698 | Not Available |
| dini family protein | E0E99_17050 | Not Available | Positive | 3503683 - 3503925 | 9256.19 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

