Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3460118 - 3460194 | Not Available |
| murein transglycosylase a | E0E99_16835 | Not Available | Positive | 3460400 - 3461497 | 40181.5 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E0E99_16840 | Not Available | Positive | 3461632 - 3462438 | 28542.6 |
| cysteine desulfurase sulfur acceptor subunit csde | E0E99_16845 | Not Available | Negative | 3462516 - 3462962 | 16079.4 |
| cysteine desulfurase csda | E0E99_16850 | Not Available | Negative | 3462962 - 3464167 | 42927.3 |
| ygdi/ygdr family lipoprotein | E0E99_16855 | Not Available | Positive | 3464360 - 3464587 | 8117.61 |
| transcriptional regulator gcva | E0E99_16860 | Not Available | Positive | 3464951 - 3465868 | 34366.4 |
| duf423 domain-containing protein | E0E99_16865 | Not Available | Positive | 3465887 - 3466282 | 14440.1 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | E0E99_16870 | Not Available | Positive | 3466275 - 3467375 | 41903.6 |
| l-fucose operon activator | E0E99_16875 | Not Available | Negative | 3467411 - 3468139 | 27191.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

