Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2509 family protein | E0E99_16780 | Not Available | Positive | 3444327 - 3444734 | 15161.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | E0E99_16785 | Not Available | Positive | 3444719 - 3445042 | 12425.3 |
| exodeoxyribonuclease v subunit gamma | E0E99_16790 | Not Available | Positive | 3445055 - 3448423 | 129189.0 |
| pitrilysin | E0E99_16795 | Not Available | Positive | 3448603 - 3451491 | 107530.0 |
| exodeoxyribonuclease v subunit beta | E0E99_16800 | Not Available | Positive | 3451484 - 3455029 | 133311.0 |
| exodeoxyribonuclease v subunit alpha | E0E99_16805 | Not Available | Positive | 3455026 - 3456855 | 66349.6 |
| amino-acid n-acetyltransferase | E0E99_16810 | Not Available | Negative | 3456979 - 3458310 | 49415.5 |
| n-acetylmuramoyl-l-alanine amidase | E0E99_16815 | Not Available | Positive | 3458545 - 3459798 | 45540.0 |
| Trna-met | Not Available | Not Available | Positive | 3459873 - 3459949 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3459993 - 3460069 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

