Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar porter family mfs transporter | E0E99_16680 | Not Available | Positive | 3423654 - 3425072 | 51691.6 |
| cupin domain-containing protein | E0E99_16685 | Not Available | Negative | 3425146 - 3425472 | 12106.6 |
| aspartate/glutamate racemase | E0E99_16690 | Not Available | Positive | 3425614 - 3426321 | 25618.8 |
| lysr family transcriptional regulator | E0E99_16695 | Not Available | Negative | 3426293 - 3427228 | 34813.3 |
| diaminopimelate decarboxylase | E0E99_16700 | Not Available | Positive | 3427347 - 3428603 | 45960.0 |
| laci family dna-binding transcriptional regulator | E0E99_16705 | Not Available | Negative | 3428711 - 3429721 | 37257.7 |
| hth-type transcriptional regulator galr | E0E99_16710 | Not Available | Negative | 3429735 - 3430763 | 37017.2 |
| hypothetical protein | E0E99_16715 | Not Available | Negative | 3430789 - 3431022 | 8686.44 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | E0E99_16720 | Not Available | Positive | 3431361 - 3433520 | 80485.4 |
| lysophospholipid transporter lplt | E0E99_16725 | Not Available | Positive | 3433513 - 3434706 | 41538.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

