Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--cysteine ligase | E0E99_16580 | Not Available | Negative | 3396686 - 3397804 | 41703.7 |
| n-acetyltransferase | E0E99_16585 | Not Available | Positive | 3397947 - 3398666 | 27135.1 |
| enterobactin synthase subunit entd | E0E99_16590 | Not Available | Negative | 3398641 - 3399294 | 23862.5 |
| tonb-dependent siderophore receptor | E0E99_16595 | Not Available | Negative | 3399344 - 3401617 | 83612.1 |
| hypothetical protein | E0E99_16600 | Not Available | Negative | 3401637 - 3401825 | 7071.81 |
| enterochelin esterase | E0E99_16605 | Not Available | Positive | 3401871 - 3403088 | 45311.6 |
| mbth family protein | E0E99_16610 | Not Available | Positive | 3403119 - 3403337 | 8364.63 |
| enterobactin non-ribosomal peptide synthetase entf | E0E99_16615 | Not Available | Positive | 3403334 - 3407224 | 142806.0 |
| lps o-antigen length regulator | E0E99_16620 | Not Available | Positive | 3407453 - 3408586 | 42378.4 |
| iron-enterobactin abc transporter atp-binding protein | E0E99_16625 | Not Available | Negative | 3408633 - 3409430 | 29110.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

