Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | E0E99_16480 | Not Available | Positive | 3369502 - 3371034 | 60627.9 |
| fatty acid metabolism transcriptional regulator fadr | E0E99_16485 | Not Available | Negative | 3371137 - 3371856 | 27054.2 |
| na(+)/h(+) antiporter nhab | E0E99_16490 | Not Available | Positive | 3372093 - 3373637 | 56638.5 |
| disulfide bond formation protein dsbb | E0E99_16495 | Not Available | Positive | 3373779 - 3374309 | 20094.3 |
| duf1971 domain-containing protein | E0E99_16500 | Not Available | Positive | 3374422 - 3374763 | 12803.9 |
| pilus assembly protein pilz | E0E99_16505 | Not Available | Positive | 3374891 - 3375146 | 9893.79 |
| luxr family transcriptional regulator | E0E99_16510 | Not Available | Positive | 3375162 - 3375749 | 22425.5 |
| eal domain-containing protein | E0E99_16515 | Not Available | Positive | 3375850 - 3376617 | 28404.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | E0E99_16520 | Not Available | Negative | 3376770 - 3386108 | 318200.0 |
| response regulator transcription factor | E0E99_16525 | Not Available | Negative | 3386305 - 3386883 | 21874.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

