Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smda family multidrug abc transporter permease/atp-binding protein | E0E99_00465 | Not Available | Negative | 94532 - 96304 | 66190.8 |
| lrp/asnc family transcriptional regulator | E0E99_00470 | Not Available | Negative | 96349 - 96807 | 17297.1 |
| plp-dependent cysteine synthase family protein | E0E99_00475 | Not Available | Positive | 96927 - 97979 | 39002.3 |
| hmp-pp phosphatase | E0E99_00480 | Not Available | Negative | 98030 - 98848 | 30202.4 |
| sgrr family transcriptional regulator | E0E99_00485 | Not Available | Positive | 99075 - 100775 | 64567.3 |
| 7-cyano-7-deazaguanine synthase quec | E0E99_00490 | Not Available | Positive | 100841 - 101536 | 25413.4 |
| ybgc/fadm family acyl-coa thioesterase | E0E99_00495 | Not Available | Negative | 101654 - 102052 | 15100.1 |
| hypothetical protein | E0E99_00500 | Not Available | Negative | 102155 - 102529 | 12846.5 |
| peptidylprolyl isomerase | E0E99_00505 | Not Available | Negative | 102676 - 104550 | 67919.2 |
| dna-binding protein hu-beta | E0E99_00510 | Not Available | Negative | 104818 - 105090 | 9196.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

