Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | E0E99_16430 | Not Available | Positive | 3358387 - 3359199 | 31085.1 |
| modd protein | E0E99_16435 | Not Available | Positive | 3359196 - 3360053 | 30301.4 |
| tonb-dependent receptor | E0E99_16440 | Not Available | Positive | 3360077 - 3362047 | 73308.8 |
| glsb/yeaq/ymge family stress response membrane protein | E0E99_16445 | Not Available | Negative | 3362089 - 3362343 | 8613.09 |
| flagellar brake protein | E0E99_16450 | Not Available | Positive | 3362545 - 3363279 | 27706.4 |
| membrane-bound lytic murein transglycosylase emta | E0E99_16455 | Not Available | Negative | 3363291 - 3363902 | 22225.8 |
| muramoyltetrapeptide carboxypeptidase | E0E99_16460 | Not Available | Positive | 3364001 - 3364915 | 33128.7 |
| potassium/proton antiporter | E0E99_16465 | Not Available | Positive | 3365013 - 3366746 | 62006.8 |
| alanine racemase | E0E99_16470 | Not Available | Negative | 3366798 - 3367868 | 38783.8 |
| d-amino acid dehydrogenase | E0E99_16475 | Not Available | Negative | 3367881 - 3369179 | 47453.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

