Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | E0E99_16380 | Not Available | Positive | 3345176 - 3347461 | 81859.9 |
| spore coat protein u | E0E99_16385 | Not Available | Positive | 3347475 - 3348443 | 33083.0 |
| glu/leu/phe/val dehydrogenase | E0E99_16390 | Not Available | Positive | 3348765 - 3350039 | 46155.2 |
| dihydroxyacetone kinase subunit dhak | E0E99_16395 | Not Available | Positive | 3350365 - 3351435 | 38280.6 |
| dihydroxyacetone kinase adp-binding subunit dhal | E0E99_16400 | Not Available | Positive | 3351447 - 3352079 | 22920.5 |
| dihydroxyacetone kinase subunit dham | E0E99_16405 | Not Available | Positive | 3352090 - 3353520 | 50862.0 |
| alpha,alpha-trehalase | E0E99_16410 | Not Available | Positive | 3353691 - 3355403 | 63670.9 |
| iron abc transporter substrate-binding protein | E0E99_16415 | Not Available | Positive | 3355611 - 3356633 | 36982.9 |
| iron abc transporter permease | E0E99_16420 | Not Available | Positive | 3356633 - 3357619 | 34691.9 |
| abc transporter atp-binding protein | E0E99_16425 | Not Available | Positive | 3357616 - 3358377 | 27294.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

