Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoimidazole riboside kinase | E0E99_16330 | Not Available | Positive | 3337175 - 3338122 | 33934.3 |
| mfs transporter | E0E99_16335 | Not Available | Positive | 3338187 - 3339446 | 47238.6 |
| luxr family transcriptional regulator | E0E99_16340 | Not Available | Negative | 3339526 - 3340077 | 21134.7 |
| two-component-system connector protein arir | E0E99_16345 | Not Available | Negative | 3340210 - 3340476 | 9562.46 |
| hypothetical protein | E0E99_16350 | Not Available | Negative | 3340511 - 3340783 | 10184.3 |
| two-component-system connector protein ycgz | E0E99_16355 | Not Available | Negative | 3340825 - 3341061 | 8899.74 |
| diguanylate phosphodiesterase | E0E99_16360 | Not Available | Positive | 3341379 - 3342608 | 45813.1 |
| merr family transcriptional regulator | E0E99_16365 | Not Available | Positive | 3342812 - 3343543 | 28160.9 |
| scpu domain-containing protein | E0E99_16370 | Not Available | Positive | 3343853 - 3344383 | 17723.7 |
| molecular chaperone | E0E99_16375 | Not Available | Positive | 3344398 - 3345120 | 25878.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

