Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-sensitive aspartokinase 3 | E0E99_16280 | Not Available | Positive | 3326124 - 3327485 | 49190.7 |
| stress response protein ychh | E0E99_16285 | Not Available | Negative | 3327600 - 3327881 | 10529.9 |
| aminoacyl-trna hydrolase | E0E99_16290 | Not Available | Positive | 3328156 - 3328740 | 21080.5 |
| redox-regulated atpase ychf | E0E99_16295 | Not Available | Positive | 3328856 - 3329950 | 39703.6 |
| ykgj family cysteine cluster protein | E0E99_16300 | Not Available | Negative | 3330123 - 3330389 | 10371.4 |
| atp--cob(i)alamin adenosyltransferase | E0E99_16305 | Not Available | Negative | 3330386 - 3331957 | 58911.1 |
| chemotaxis protein | E0E99_16310 | Not Available | Negative | 3332004 - 3333101 | 38942.4 |
| wyl domain-containing protein | E0E99_16315 | Not Available | Negative | 3333140 - 3334060 | 35717.9 |
| laci family dna-binding transcriptional regulator | E0E99_16320 | Not Available | Negative | 3334538 - 3335533 | 36526.3 |
| glycoside hydrolase family 32 protein | E0E99_16325 | Not Available | Positive | 3335708 - 3337144 | 54603.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

