Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | E0E99_16225 | Not Available | Positive | 3316570 - 3317634 | 36313.6 |
| l,d-transpeptidase | E0E99_16230 | Not Available | Positive | 3317762 - 3318691 | 33935.8 |
| abc transporter atp-binding protein | E0E99_16235 | Not Available | Negative | 3318716 - 3319399 | 25261.6 |
| iron abc transporter permease | E0E99_16240 | Not Available | Negative | 3319410 - 3321098 | 60532.8 |
| extracellular solute-binding protein | E0E99_16245 | Not Available | Negative | 3321082 - 3322119 | 37556.1 |
| Trna-asn | Not Available | Not Available | Positive | 3322379 - 3322454 | Not Available |
| dgsa anti-repressor mtfa | E0E99_16255 | Not Available | Negative | 3322587 - 3323351 | 29268.7 |
| Trna-ser | Not Available | Not Available | Positive | 3323445 - 3323534 | Not Available |
| multidrug smr transporter | E0E99_16270 | Not Available | Positive | 3324038 - 3324370 | 11711.6 |
| porin | E0E99_16275 | Not Available | Negative | 3324473 - 3325639 | 42591.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

