Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-6a reductase | E0E99_16175 | Not Available | Positive | 3308940 - 3309725 | 28327.1 |
| sirohydrochlorin cobaltochelatase | E0E99_16180 | Not Available | Positive | 3309736 - 3310530 | 29154.1 |
| cobalt-factor ii c(20)-methyltransferase | E0E99_16185 | Not Available | Positive | 3310527 - 3311240 | 25872.3 |
| cobalt ecf transporter s component cbim | E0E99_16190 | Not Available | Positive | 3311237 - 3311974 | 26373.6 |
| energy-coupling factor abc transporter substrate-binding protein | E0E99_16195 | Not Available | Positive | 3311977 - 3312258 | 10273.4 |
| energy-coupling factor abc transporter transmembrane protein | E0E99_16200 | Not Available | Positive | 3312245 - 3312922 | 25902.7 |
| energy-coupling factor abc transporter atp-binding protein | E0E99_16205 | Not Available | Positive | 3312931 - 3313746 | 30033.2 |
| cobyric acid synthase | E0E99_16210 | Not Available | Positive | 3313743 - 3315263 | 55157.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | E0E99_16215 | Not Available | Positive | 3315260 - 3315805 | 19970.0 |
| adenosylcobinamide-gdp ribazoletransferase | E0E99_16220 | Not Available | Positive | 3315802 - 3316545 | 26322.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

