Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein pocr | E0E99_16125 | Not Available | Positive | 3299640 - 3300551 | 34249.9 |
| cobyrinate a,c-diamide synthase | E0E99_16130 | Not Available | Positive | 3301147 - 3302526 | 49881.0 |
| cobalamin biosynthesis protein | E0E99_16135 | Not Available | Positive | 3302523 - 3303482 | 35392.2 |
| cobalt-precorrin-8 methylmutase | E0E99_16140 | Not Available | Positive | 3303493 - 3304125 | 22881.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | E0E99_16145 | Not Available | Positive | 3304122 - 3305258 | 40849.5 |
| cobalt-precorrin-7 (c(5))-methyltransferase | E0E99_16150 | Not Available | Positive | 3305252 - 3305857 | 22010.8 |
| decarboxylating cobalt-precorrin-6b (c(15))-methyltransferase | E0E99_16155 | Not Available | Positive | 3305847 - 3306416 | 20529.0 |
| cobalt-precorrin-4 methyltransferase | E0E99_16160 | Not Available | Positive | 3306409 - 3307182 | 28286.8 |
| cobalt-precorrin 5a hydrolase | E0E99_16165 | Not Available | Positive | 3307163 - 3308218 | 37992.2 |
| precorrin-3b c(17)-methyltransferase | E0E99_16170 | Not Available | Positive | 3308218 - 3308943 | 25897.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

