Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is30 family transposase | E0E99_15975 | Not Available | Negative | 3273860 - 3273977 | 4430.17 |
| thiosulfate reductase phsa | E0E99_15980 | Not Available | Positive | 3274027 - 3276300 | 82796.3 |
| thiosulfate reductase electron transport protein phsb | E0E99_15985 | Not Available | Positive | 3276315 - 3276893 | 21664.7 |
| thiosulfate reductase cytochrome b subunit | E0E99_15990 | Not Available | Positive | 3276890 - 3277657 | 28565.8 |
| serine-type d-ala-d-ala carboxypeptidase dacd | E0E99_15995 | Not Available | Positive | 3277797 - 3278969 | 43214.6 |
| dna gyrase inhibitor sbmc | E0E99_16000 | Not Available | Positive | 3279093 - 3279560 | 17944.4 |
| fusc family protein | E0E99_16005 | Not Available | Positive | 3279668 - 3280726 | 39734.7 |
| duf496 family protein | E0E99_16010 | Not Available | Positive | 3280965 - 3281300 | 12976.7 |
| l-threonine kinase | E0E99_16015 | Not Available | Negative | 3281341 - 3282207 | 31735.2 |
| acetate/propionate family kinase | E0E99_16020 | Not Available | Negative | 3282300 - 3283514 | 43740.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

