Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase subunit paai | E0E99_15920 | Not Available | Negative | 3264687 - 3265442 | 27969.2 |
| 1,2-phenylacetyl-coa epoxidase subunit b | E0E99_15925 | Not Available | Negative | 3265450 - 3265737 | 10950.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | E0E99_15930 | Not Available | Negative | 3265749 - 3266678 | 35115.7 |
| phenylacetic acid degradation bifunctional protein paaz | E0E99_15935 | Not Available | Positive | 3266964 - 3269009 | 73237.9 |
| Trna-asn | Not Available | Not Available | Positive | 3269092 - 3269167 | Not Available |
| emmdr/yeeo family multidrug/toxin efflux mate transporter | E0E99_15945 | Not Available | Positive | 3269328 - 3270815 | 53946.3 |
| Trna-asn | Not Available | Not Available | Positive | 3270915 - 3270990 | Not Available |
| hth-type transcriptional regulator cbl | E0E99_15955 | Not Available | Negative | 3271131 - 3272081 | 35604.9 |
| nitrogen assimilation transcriptional regulator | E0E99_15960 | Not Available | Negative | 3272183 - 3273100 | 32809.9 |
| Trna-asn | Not Available | Not Available | Positive | 3273427 - 3273502 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

