Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacylase | E0E99_15770 | Not Available | Negative | 3232159 - 3232980 | 31100.4 |
| n-acetylglucosamine kinase | E0E99_15775 | Not Available | Negative | 3232996 - 3233907 | 33098.6 |
| lipoprotein-releasing abc transporter permease subunit lole | E0E99_15780 | Not Available | Negative | 3233997 - 3235241 | 45117.6 |
| lipoprotein-releasing abc transporter atp-binding protein lold | E0E99_15785 | Not Available | Negative | 3235241 - 3235942 | 25437.8 |
| lipoprotein-releasing abc transporter permease subunit lolc | E0E99_15790 | Not Available | Negative | 3235935 - 3237134 | 43265.7 |
| hypothetical protein | E0E99_15795 | Not Available | Positive | 3237396 - 3238460 | 40233.4 |
| transcription-repair coupling factor | E0E99_15800 | Not Available | Positive | 3238579 - 3242025 | 129898.0 |
| lysm peptidoglycan-binding domain-containing protein | E0E99_15805 | Not Available | Positive | 3242175 - 3243140 | 34652.9 |
| duf1471 domain-containing protein | E0E99_15810 | Not Available | Negative | 3243227 - 3243484 | 8774.46 |
| tetr family copper-responsive transcriptional repressor comr | E0E99_15815 | Not Available | Positive | 3243728 - 3244363 | 23651.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

