Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | E0E99_15715 | Not Available | Positive | 3221604 - 3221972 | 13678.3 |
| phage tail protein | E0E99_15720 | Not Available | Negative | 3222009 - 3222178 | 5917.1 |
| two-component system response regulator phop | E0E99_15730 | Not Available | Positive | 3223301 - 3223975 | 25642.9 |
| two-component system sensor histidine kinase phoq | E0E99_15735 | Not Available | Positive | 3223975 - 3225438 | 55319.6 |
| cupin domain-containing protein | E0E99_15740 | Not Available | Positive | 3225531 - 3226652 | 42702.3 |
| peptidase t | E0E99_15745 | Not Available | Negative | 3226755 - 3227981 | 44706.8 |
| spermidine/putrescine abc transporter atp-binding protein pota | E0E99_15750 | Not Available | Positive | 3228232 - 3229368 | 42953.6 |
| spermidine/putrescine abc transporter permease potb | E0E99_15755 | Not Available | Positive | 3229352 - 3230209 | 32248.3 |
| spermidine/putrescine abc transporter permease potc | E0E99_15760 | Not Available | Positive | 3230206 - 3230985 | 28526.2 |
| spermidine/putrescine abc transporter substrate-binding protein potd | E0E99_15765 | Not Available | Positive | 3231013 - 3232059 | 39025.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

