Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uree | E0E99_15665 | Not Available | Negative | 3212920 - 3213378 | 16849.2 |
| urease subunit alpha | E0E99_15670 | Not Available | Negative | 3213388 - 3215091 | 60467.3 |
| urease subunit beta | E0E99_15675 | Not Available | Negative | 3215084 - 3215404 | 11716.0 |
| urease subunit gamma | E0E99_15680 | Not Available | Negative | 3215414 - 3215716 | 11098.6 |
| urease accessory protein ured | E0E99_15685 | Not Available | Negative | 3215727 - 3216467 | 27728.7 |
| anion permease | E0E99_15690 | Not Available | Negative | 3216672 - 3218135 | 52767.6 |
| l(+)-tartrate dehydratase subunit beta | E0E99_15695 | Not Available | Negative | 3218184 - 3218789 | 22595.7 |
| l(+)-tartrate dehydratase subunit alpha | E0E99_15700 | Not Available | Negative | 3218786 - 3219694 | 32595.2 |
| lysr family transcriptional regulator | E0E99_15705 | Not Available | Positive | 3219907 - 3220848 | 35077.1 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | E0E99_15710 | Not Available | Negative | 3220880 - 3221497 | 22072.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

