Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_15400 | Not Available | Negative | 3170224 - 3171021 | 30851.4 |
| tonb-dependent receptor | E0E99_15620 | Not Available | Negative | 3202710 - 3204707 | 74195.3 |
| ynce family protein | E0E99_15625 | Not Available | Negative | 3204718 - 3205767 | 38242.6 |
| hypothetical protein | E0E99_15630 | Not Available | Positive | 3205752 - 3205916 | 6328.02 |
| rna polymerase sigma factor rpod | E0E99_15635 | Not Available | Negative | 3205929 - 3207776 | 70579.5 |
| dna primase | E0E99_15640 | Not Available | Negative | 3208136 - 3209881 | 65302.3 |
| 30s ribosomal protein s21 | E0E99_15645 | Not Available | Negative | 3210119 - 3210334 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | E0E99_15650 | Not Available | Positive | 3210571 - 3211584 | 36133.7 |
| urease accessory protein ureg | E0E99_15655 | Not Available | Negative | 3211622 - 3212239 | 22210.7 |
| urease accessory protein uref | E0E99_15660 | Not Available | Negative | 3212249 - 3212920 | 25318.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

