Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translational gtpase typa | E0E99_15350 | Not Available | Negative | 3155712 - 3157535 | 67369.6 |
| glutamate--ammonia ligase | E0E99_15355 | Not Available | Positive | 3157916 - 3159325 | 52009.9 |
| nitrogen regulation protein nr(ii) | E0E99_15360 | Not Available | Positive | 3159607 - 3160656 | 38364.3 |
| nitrogen regulation protein nr(i) | E0E99_15365 | Not Available | Positive | 3160667 - 3162076 | 52376.0 |
| hypothetical protein | E0E99_15370 | Not Available | Positive | 3162188 - 3162298 | 3632.48 |
| oxygen-independent coproporphyrinogen iii oxidase | E0E99_15375 | Not Available | Negative | 3162388 - 3163761 | 52637.8 |
| der gtpase-activating protein yihi | E0E99_15380 | Not Available | Negative | 3163950 - 3164462 | 18987.3 |
| yiha family ribosome biogenesis gtp-binding protein | E0E99_15385 | Not Available | Positive | 3165023 - 3165655 | 23525.4 |
| dna polymerase i | E0E99_15390 | Not Available | Negative | 3165988 - 3168774 | 103410.0 |
| hypothetical protein | E0E99_15395 | Not Available | Positive | 3169017 - 3169586 | 21403.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

