Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | E0E99_15300 | Not Available | Negative | 3144102 - 3144905 | 29080.5 |
| sugar kinase | E0E99_15305 | Not Available | Negative | 3144939 - 3145835 | 31568.2 |
| sulfolactaldehyde 3-reductase | E0E99_15310 | Not Available | Positive | 3146002 - 3146898 | 31403.3 |
| sulfofructosephosphate aldolase | E0E99_15315 | Not Available | Positive | 3146909 - 3147784 | 31849.7 |
| sulfoquinovose isomerase | E0E99_15320 | Not Available | Positive | 3147799 - 3149040 | 47254.6 |
| aldose-1-epimerase | E0E99_15325 | Not Available | Positive | 3149059 - 3149901 | 31381.4 |
| alpha-glucosidase | E0E99_15330 | Not Available | Positive | 3149950 - 3151986 | 77140.8 |
| hypothetical protein | E0E99_15335 | Not Available | Positive | 3152032 - 3153414 | 50682.9 |
| mfs transporter | E0E99_15340 | Not Available | Positive | 3153461 - 3154882 | 52364.0 |
| porin ompl | E0E99_15345 | Not Available | Positive | 3154949 - 3155641 | 27087.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

