Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit beta | E0E99_15245 | Not Available | Positive | 3136733 - 3137635 | 32992.0 |
| formate dehydrogenase cytochrome b556 subunit | E0E99_15250 | Not Available | Positive | 3137632 - 3138267 | 24665.7 |
| formate dehydrogenase accessory protein fdhe | E0E99_15255 | Not Available | Positive | 3138264 - 3139193 | 34856.7 |
| type ii toxin-antitoxin system vapc family toxin | E0E99_15260 | Not Available | Negative | 3139230 - 3139604 | 13675.7 |
| ribbon-helix-helix protein, copg family | E0E99_15265 | Not Available | Negative | 3139604 - 3139852 | 9670.61 |
| alpha/beta hydrolase | E0E99_15270 | Not Available | Positive | 3140052 - 3140960 | 33479.8 |
| gnat family n-acetyltransferase | E0E99_15280 | Not Available | Negative | 3141111 - 3142100 | 37154.5 |
| d-tyrosyl-trna(tyr) deacylase | E0E99_15285 | Not Available | Negative | 3142097 - 3142534 | 16003.1 |
| virulence factor brkb family protein | E0E99_15290 | Not Available | Negative | 3142531 - 3143403 | 32789.6 |
| glucose-1-phosphatase | E0E99_15295 | Not Available | Negative | 3143397 - 3143996 | 22785.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

