Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1145 family protein | E0E99_14990 | Not Available | Negative | 3089340 - 3089615 | 10617.9 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | E0E99_14995 | Not Available | Negative | 3089605 - 3090201 | 22033.3 |
| signal recognition particle-docking protein ftsy | E0E99_15000 | Not Available | Positive | 3090478 - 3092004 | 55835.7 |
| cell division atp-binding protein ftse | E0E99_15005 | Not Available | Positive | 3092007 - 3092675 | 24371.7 |
| cell division protein ftsx | E0E99_15010 | Not Available | Positive | 3092668 - 3093726 | 38580.0 |
| rna polymerase sigma factor rpoh | E0E99_15015 | Not Available | Positive | 3093982 - 3094836 | 32515.7 |
| branched-chain amino acid abc transporter substrate-binding protein | E0E99_15020 | Not Available | Positive | 3095092 - 3096210 | 39646.4 |
| aspartate 1-decarboxylase autocleavage activator panm | E0E99_15030 | Not Available | Negative | 3096405 - 3096788 | 14484.1 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | E0E99_15035 | Not Available | Positive | 3097212 - 3098321 | 39534.3 |
| high-affinity branched-chain amino acid abc transporter permease livh | E0E99_15040 | Not Available | Positive | 3098383 - 3099309 | 32953.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

