Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | E0E99_14940 | Not Available | Negative | 3080540 - 3080941 | 15109.7 |
| 4'-phosphopantetheinyl transferase acpt | E0E99_14945 | Not Available | Negative | 3080991 - 3081569 | 21015.1 |
| ai-2e family transporter | E0E99_14950 | Not Available | Negative | 3081632 - 3082681 | 38400.5 |
| mfs transporter | E0E99_14955 | Not Available | Positive | 3082815 - 3084032 | 42108.1 |
| duf1795 domain-containing protein | E0E99_14960 | Not Available | Negative | 3084036 - 3084593 | 19618.3 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | E0E99_14965 | Not Available | Negative | 3084666 - 3085331 | 25293.4 |
| sulfurtransferase tusa | E0E99_14970 | Not Available | Positive | 3085500 - 3085745 | 9123.05 |
| zn(ii)/cd(ii)/pb(ii) translocating p-type atpase znta | E0E99_14975 | Not Available | Negative | 3085839 - 3088037 | 76852.5 |
| lysoplasmalogenase | E0E99_14980 | Not Available | Negative | 3088112 - 3088738 | 23565.8 |
| duf2500 domain-containing protein | E0E99_14985 | Not Available | Positive | 3088880 - 3089239 | 13560.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

