Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_14840 | Not Available | Negative | 3055974 - 3056315 | 12647.7 |
| hth-type transcriptional repressor nsrr | E0E99_14845 | Not Available | Positive | 3056296 - 3056721 | 15592.0 |
| ribonuclease r | E0E99_14850 | Not Available | Positive | 3056878 - 3059340 | 93059.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | E0E99_14855 | Not Available | Positive | 3059411 - 3060142 | 26574.3 |
| hypothetical protein | E0E99_14860 | Not Available | Positive | 3060263 - 3060497 | 9020.21 |
| glutathione-disulfide reductase | E0E99_14865 | Not Available | Negative | 3060513 - 3061865 | 48757.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | E0E99_14870 | Not Available | Negative | 3061970 - 3062812 | 32029.4 |
| oligopeptidase a | E0E99_14875 | Not Available | Positive | 3063021 - 3065063 | 77106.2 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | E0E99_14880 | Not Available | Positive | 3065072 - 3065821 | 26827.6 |
| nad(p)/fad-dependent oxidoreductase | E0E99_14885 | Not Available | Negative | 3065927 - 3067126 | 43290.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

