Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | E0E99_14790 | Not Available | Positive | 3045567 - 3046028 | 16953.3 |
| n-acetylmuramoyl-l-alanine amidase amib | E0E99_14795 | Not Available | Positive | 3046045 - 3047376 | 47476.4 |
| dna mismatch repair endonuclease mutl | E0E99_14800 | Not Available | Positive | 3047386 - 3049257 | 68472.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | E0E99_14805 | Not Available | Positive | 3049250 - 3050200 | 35124.1 |
| rna chaperone hfq | E0E99_14810 | Not Available | Positive | 3050285 - 3050593 | 11137.0 |
| gtpase hflx | E0E99_14815 | Not Available | Positive | 3050668 - 3051948 | 48270.9 |
| ftsh protease activity modulator hflk | E0E99_14820 | Not Available | Positive | 3052138 - 3053391 | 45512.5 |
| protease modulator hflc | E0E99_14825 | Not Available | Positive | 3053394 - 3054398 | 37455.8 |
| duf2065 family protein | E0E99_14830 | Not Available | Positive | 3054481 - 3054678 | 7050.15 |
| adenylosuccinate synthase | E0E99_14835 | Not Available | Positive | 3054781 - 3056079 | 47341.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

