Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2645 family protein | E0E99_14740 | Not Available | Positive | 3035535 - 3035849 | 12378.3 |
| miniconductance mechanosensitive channel mscm | E0E99_14745 | Not Available | Negative | 3035939 - 3039253 | 123222.0 |
| phosphatidylserine decarboxylase | E0E99_14750 | Not Available | Negative | 3039271 - 3040239 | 36101.5 |
| small ribosomal subunit biogenesis gtpase rsga | E0E99_14755 | Not Available | Negative | 3040332 - 3041408 | 40103.5 |
| oligoribonuclease | E0E99_14760 | Not Available | Positive | 3041490 - 3042035 | 20759.7 |
| Trna-gly | Not Available | Not Available | Positive | 3042221 - 3042296 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3042334 - 3042409 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3042565 - 3042640 | Not Available |
| trna epoxyqueuosine(34) reductase queg | E0E99_14780 | Not Available | Negative | 3042910 - 3044049 | 43089.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | E0E99_14785 | Not Available | Positive | 3044048 - 3045595 | 54540.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

