Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | E0E99_00320 | Not Available | Negative | 67893 - 69824 | 70708.9 |
| adenine phosphoribosyltransferase | E0E99_00325 | Not Available | Negative | 69943 - 70494 | 20008.4 |
| duf454 family protein | E0E99_00330 | Not Available | Negative | 70688 - 71065 | 14558.8 |
| primosomal replication protein n'' | E0E99_00335 | Not Available | Positive | 71147 - 71662 | 20162.1 |
| duf2496 domain-containing protein | E0E99_00340 | Not Available | Positive | 71677 - 71838 | 5924.18 |
| mechanosensitive channel msck | E0E99_00345 | Not Available | Negative | 71914 - 75279 | 126499.0 |
| dna-binding transcriptional repressor acrr | E0E99_00350 | Not Available | Negative | 75406 - 76056 | 25021.3 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | E0E99_00355 | Not Available | Positive | 76198 - 77391 | 42165.2 |
| multidrug efflux rnd transporter permease subunit | E0E99_00360 | Not Available | Positive | 77414 - 80563 | 113445.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 77882 - 78065 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

