Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein blc | E0E99_14685 | Not Available | Negative | 3025332 - 3025865 | 19921.9 |
| class c beta-lactamase cmy-109 | E0E99_14690 | Not Available | Negative | 3025958 - 3027103 | 41948.6 |
| lysr family transcriptional regulator | E0E99_14695 | Not Available | Positive | 3027235 - 3028110 | 32521.2 |
| fumarate reductase subunit frdd | E0E99_14700 | Not Available | Negative | 3028153 - 3028509 | 13046.6 |
| fumarate reductase subunit frdc | E0E99_14705 | Not Available | Negative | 3028520 - 3028915 | 14880.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E0E99_14710 | Not Available | Negative | 3028926 - 3029660 | 27158.5 |
| fumarate reductase (quinol) flavoprotein subunit | E0E99_14715 | Not Available | Negative | 3029653 - 3031443 | 65412.8 |
| elongation factor p--(r)-beta-lysine ligase | E0E99_14720 | Not Available | Positive | 3031768 - 3032745 | 36965.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | E0E99_14725 | Not Available | Positive | 3032960 - 3034462 | 54658.1 |
| hypothetical protein | E0E99_14735 | Not Available | Positive | 3035226 - 3035534 | 11784.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

