Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | E0E99_14585 | Not Available | Positive | 3006047 - 3007768 | 61782.0 |
| fatty acid--coa ligase | E0E99_14590 | Not Available | Negative | 3007988 - 3009649 | 61293.9 |
| Trna-phe | Not Available | Not Available | Positive | 3010089 - 3010164 | Not Available |
| transcriptional regulator | E0E99_14600 | Not Available | Negative | 3010318 - 3010893 | 21797.2 |
| protein-disulfide reductase dsbd | E0E99_14605 | Not Available | Negative | 3010930 - 3012639 | 61963.9 |
| divalent cation tolerance protein cuta | E0E99_14610 | Not Available | Negative | 3012615 - 3012962 | 12828.4 |
| anaerobic c4-dicarboxylate transporter | E0E99_14615 | Not Available | Negative | 3013091 - 3014392 | 45713.6 |
| aspartate ammonia-lyase | E0E99_14620 | Not Available | Negative | 3014508 - 3015944 | 52190.0 |
| membrane protein fxsa | E0E99_14625 | Not Available | Positive | 3016283 - 3016759 | 17653.2 |
| l-methionine/branched-chain amino acid transporter | E0E99_14630 | Not Available | Negative | 3016809 - 3018074 | 45148.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

