Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | E0E99_14530 | Not Available | Negative | 2991257 - 2993524 | 83949.1 |
| transcriptional regulator melr | E0E99_14535 | Not Available | Negative | 2993762 - 2994694 | 35633.7 |
| alpha-galactosidase | E0E99_14540 | Not Available | Positive | 2994964 - 2996319 | 50634.9 |
| melibiose:sodium transporter melb | E0E99_14545 | Not Available | Positive | 2996412 - 2997842 | 52727.4 |
| hypothetical protein | E0E99_14550 | Not Available | Positive | 2997845 - 2998099 | 9471.96 |
| duf2238 domain-containing protein | E0E99_14555 | Not Available | Negative | 2998120 - 2998743 | 22997.8 |
| fumarate hydratase | E0E99_14560 | Not Available | Negative | 2998891 - 3000537 | 59879.4 |
| anaerobic c4-dicarboxylate transporter | E0E99_14565 | Not Available | Negative | 3000634 - 3001974 | 47982.3 |
| two-component system response regulator dcur | E0E99_14570 | Not Available | Negative | 3002691 - 3003410 | 27553.9 |
| two-component system sensor histidine kinase dcus | E0E99_14575 | Not Available | Negative | 3003407 - 3005038 | 60437.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

