Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clamp-binding protein crfc | E0E99_14480 | Not Available | Positive | 2978460 - 2980817 | 88781.3 |
| hypothetical protein | E0E99_14485 | Not Available | Positive | 2980814 - 2981707 | 33272.1 |
| 2-keto-3-deoxygluconate transporter | E0E99_14490 | Not Available | Negative | 2981738 - 2982736 | 34058.4 |
| proline/glycine betaine transporter prop | E0E99_14495 | Not Available | Positive | 2983435 - 2984937 | 54857.2 |
| lpxt activity modulator pmrr | E0E99_14500 | Not Available | Positive | 2985095 - 2985184 | 3390.18 |
| two-component system sensor histidine kinase pmrb | E0E99_14505 | Not Available | Negative | 2985178 - 2986260 | 40573.5 |
| two-component system response regulator pmra | E0E99_14510 | Not Available | Negative | 2986261 - 2986929 | 25036.2 |
| phosphoethanolamine transferase epta | E0E99_14515 | Not Available | Negative | 2986934 - 2988571 | 61109.1 |
| arginine/agmatine antiporter | E0E99_14520 | Not Available | Negative | 2988719 - 2990056 | 47032.6 |
| arac family transcriptional regulator | E0E99_14525 | Not Available | Negative | 2990184 - 2990945 | 28840.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

